My first go at a snakemake pipeline. The biological question is looking at host-response in humans infected with Toxoplasma, so there is a somewhat unusual fastq decontamination step if you aren't used to metagenomics (this isn't metagenomics).
My first go at a snakemake pipeline. The biological question is looking at host-response in humans infected with Toxoplasma, so there is a somewhat unusual fastq decontamination step if you aren't used to metagenomics (this isn't metagenomics).
My first go at a snakemake pipeline. The biological question is looking at host-response in humans infected with Toxoplasma, so there is a somewhat unusual fastq decontamination step if you aren't used to metagenomics (this isn't metagenomics).