Thierry Gosselin's starred repositories
missRanger
R package "missRanger" for fast imputation of missing values by random forests.
stacks_workflow
RADseq workflow built around STACKS
terastructure
TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 observed genotypes, i.e., 1M individuals at 1M SNPs). This package provides a scalable, multi-threaded C++ implementation that can be run on a single computer.
eca-bioinf-handbook
Lecture notes/book in progress on computing for conservation genomics
genepopedit
Simple and flexible manipulation of genomic data.
Lobster-assigner
Assigner tutorial for Benestan et al. erratum