theranosisls's starred repositories
BIOC-570-Final-Project-YO
Final Project: Primer Design for Gibson Assembly
assembly_cloning
R scripts for Gibson Assembly and Golden Gate Assembly cloning.
gibson-walkthrough
Walkthrough for Gibson Assembly
Gibson-Assembly-Calculator
Gibson Assembly calculator for 2-,3-,4-,5-fragments.
nanopolish
Signal-level algorithms for MinION data
Digester-MultiSequencing
Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing
2022-qupath-hackathon
From 26-29 April 2022
OME-TIFF_Generator
Script to generate OME-TIFF
cosmosid-cli
Command line client and Python libraries for CosmosID API
ProteoformAnanlysis
This repository contains all ananlysis scripts for proteoform analysis with CCprofiler and COPF.
Pfizer_BioNTech_BNT162b2_vaccine_effectiveness_vs_Omicron
Code and data for "Predicted Symptomatic Effectiveness of Pfizer-BioNTech BNT162b2 Vaccine Against Omicron Variant of SARS-CoV-2" paper
Crick-UCLH-Legacy-VOCs-2021-05
Data and analysis scripts for "Limits of neutralising antibody activity against SARS-CoV-2 variants of concern B.1.617.2 and B.1.351 elicited by partial or full vaccination with BNT162b2 (Pfizer-BioNTech)"
DeepNovoAA
DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.
BioDepot-workflow-builder
:computer: GUI for creating bioinformatics workflows from :whale: Docker containers:
mutation-signatures
Create mutation signatures from MAF's, and decompose them into Stratton signatures