theosanderson

taxonium

A tool for exploring very large trees in the browser

chronumental

Estimating time trees from very large phylogenies

adhoc_covid

gensplore

Lightweight genome browser for microbial genomes

deeperseq

Browse FASTQs for SARS-CoV-2 genomes from the SRA/ENA

hospitalmedicines

cov2tree

Cov2Tree website, based on Taxodium

genomium

A portal for a set of microbial sequence tools

malaria_phenotype_papers

Using a GPT3-based classifier to identify malaria papers reporting phenotypes

mpxTree

OpenRoboticIncubator

An open-source hardware robotic incubator.

genbank_api

molnupiravir

theo.io

Personal website

awesome-genome-visualization

A list of interesting genome browser or genome-browser-like implementations

blueskybot_malariapapers

chron_simulations

evensampling

Sample according to known true geographic distributions

insertions3

LAPIS

An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2

lineage_network

A tool for visualising genetic distance between SARS-CoV-2 PANGO lineages

mojo

The Mojo Programming Language

mov_streamlit

nc_gisaid_wrangling

next-mutation-app

phylojs

Javascript library for manipulating phylogenetic trees

plasmodium-phenotype-extractor-gpt4

temporal_variability

viralphylo-exercises

www.keycloakify.dev

🏠 The Keycloakify project landingpage