theo-allnutt-bioinformatics

circles

Draw blast ring diagrams

scripts

bioinformatic scripts

031_lduffy_csiro

033_glen

033 analysis scripts and pipeline, masterscript = genomes.sh

070_stat_RNAseq

071_metagenomics_course

metagenomics

scripts for metagenomics

pangenome_using_uclust

RNAseq

RNAseq pipeline

VBA_scripts

Various scripts for data processing in Microsoft Excel

Allnutt_etal_2020_expanding_the_taxonomic

Supplmentary data for the publication

Dewar_etal_2021

Bioinformatic analyses for the publication, Dewar et al., 2019

entropy

Scripts for entropy calculation and filtering

genomes_update

Search NCBI for latest genome and sequence data for a specified taxon

Hasebe_2019

Pipeline and scripts for the publication Hasebe et al., 2019.

HybPiper

Recovering genes from targeted sequence capture data

Indigenous_gut_mircobiome_2023

Indigenous_gut_mircobiome_2023

King_etal_2018

MiCoP

milton-contrib

Useful scripts and other files for the WEHI HPC

public-data

R-scripts

slides

standard_conditions

Trevathan-Tackett_2018