LPMao's repositories
TCR-repertoire-database
Antigen specific TCR repertoire database for Luo et al., 2022 Nature Aging paper (Multidimensional single-cell analysis of human peripheral blood reveals characteristic features of the immune system landscape in aging and frailty)
addinslist
📜 Discover and install useful RStudio addins
AGAT
Another Gtf/Gff Analysis Toolkit
ALLSorts
ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.
awesome-pipeline
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
BENG183_2023Fall_Applied-Genomic-Technologies
Repository for BENG 183 Applied Genomic Technologies
Biogit
Some Code write
covizu
Rapid analysis and visualization of coronavirus genome variation
csvtk
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
dowhy
DoWhy is a Python library for causal inference that supports explicit modeling and testing of causal assumptions. DoWhy is based on a unified language for causal inference, combining causal graphical models and potential outcomes frameworks.
EconML
ALICE (Automated Learning and Intelligence for Causation and Economics) is a Microsoft Research project aimed at applying Artificial Intelligence concepts to economic decision making. One of its goals is to build a toolkit that combines state-of-the-art machine learning techniques with econometrics in order to bring automation to complex causal inference problems. To date, the ALICE Python SDK (econml) implements orthogonal machine learning algorithms such as the double machine learning work of Chernozhukov et al. This toolkit is designed to measure the causal effect of some treatment variable(s) t on an outcome variable y, controlling for a set of features x.
gpt4free
decentralising the Ai Industry, just some language model api's...
HiC_tools
A collection of tools for Hi-C data analysis
HLA-LA
Fast HLA type inference from whole-genome data
Interestingmyscript
Interesting script I write
javascript-for-r
📚 JavaScript for R CRC Book
learn
my learning journey
Machine_Learning_Code_Implementation
Mathematical derivation and pure Python code implementation of machine learning algorithms.
pMTnet
Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
Py4Bio
Public data for the book Python for Bioinformatics
pyro-cov
Pyro models of SARS-CoV-2 variants
SARS-CoV-2_Sequencing
A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
StableNet
Official repository for CVPR21 paper "Deep Stable Learning for Out-Of-Distribution Generalization".
TESSA
Mapping the Functional Landscape of TCR Repertoire
Thinkbayes2_cn
Thinkbayes2_chinese