The Hyve's repositories
glowing-bear
:bear: The open source cohort selection and analysis interface
sas-convert
Simple SAS7BDAT to CSV conversion tool based on the Parso library.
cbioportal
cBioPortal topic branches at The Hyve
pmc-conversion
Data extraction, transformation and loading pipeline for the Princess Maxima Center
whereabouts
Data warehouse Inventory Management System
amazing-planning-generator
Sharks gotta swim. Bats gotta fly. And I'll need a weekly planning till I die.
biocypher-cbioportal
a cBioPortal adapter for the BioCypher framework
fairspace-jupyter
Code for connecting JupyterHub to Fairspace
OHDSI-WebAPI
[Under development] OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications
fairspace-keycloak
Helm chart for installing Keycloak for Fairspace
OHDSI-WhiteRabbit
WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an ETL. It comes with RabbitInAHat, an application for interactive design of an ETL to the OMOP Common Data Model with the help of the the scan report generated by White Rabbit.
caciocavallo
headless Swing UI testing
cbioportal-frontend
React Frontend of cBioPortal :tada:
CdmOnboardingETL
R Package to support the onboarding process of new CDMs in the DARWIN EU Data Network
fairspace-build-scripts
A set of build scripts used in all Fairspace repositories
genetics-colocalisation
Colocalisation pipeline for Open Targets Genetics
genetics-finemapping
Fine-mapping pipeline for Open Targets Genetics
genetics-sumstat-data
Workflows for processing summary statistics files for Open Targets Genetics
gentropy
Open Targets python framework for post-GWAS analysis
OHDSI-Usagi
Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.
omop-cdm
SQLAlchemy definition of the OMOP CDM
password-encoder
Simple command line password encoder tool
platform-api
GraphQL and Rest API rewrite of the current Open Targets platform API
radar-data-dashboard-backend
RADAR-base Data Dashboard backend
single-cell-explorer
Hosted version of cellxgene