RT-qPCR data from the TaqMan Pooling evaluation study conducted at the LSTC
File Descriptions:
- Descriptive statistics of Asymp - GraphPad analysis of Asymptomatic (A) pooled (P) and decovoluted (D) samples by ORF1ab (O), Nucleocapsid (N), and Spike (S) genes.
- Descriptive statistics of Symp - GraphPad analysis of Symptomatic (S) pooled (P) and decovoluted (D) samples by ORF1ab (O), Nucleocapsid (N), and Spike (S) genes.
- Descriptive statistics of prevalence - GraphPad analysis of monthly prevalence of SARS-CoV-2 reactive tests at LSTC from Aug 2020 to Apr 2021
- Unpaired t test of All Shift- 1 - GraphPad analysis; independant t-test to compare Ct shift of ORF1ab gene in Asymptomatic and Symptomatic cohorts.
- Unpaired t test of All Shift- 2 - GraphPad analysis; independant t-test to compare Ct shift of N gene in Asymptomatic and Symptomatic cohorts.
- Unpaired t test of All Shift- 3 - GraphPad analysis; independant t-test to compare Ct shift of S gene in Asymptomatic and Symptomatic cohorts.
- raw_data_TaqMan - Ct values for pooled, deconvoluted, and Ct shift for Asymptomatic and Symptomatic samples in XLS format.
- tf_asymp_R - Ct values for pooled, deconvoluted, and Ct shift for Asymptomatic samples in CSV format for R data analysis.
- tf_symp_R - Ct values for pooled, deconvoluted, and Ct shift for Symptomatic samples in CSV format for R data analysis.
- permutation_test_final - R script used to perform permutation test.
- PlosOne_figures - GraphPad file including all analysis performed on software.