tdsone

extract-line-chart-data

A repo that lets you automatically extract the data of a line chart.

borzoi

RNA-seq prediction with deep convolutional neural networks.

Buchhaltung-und-Steuern-lernen

Buchhaltung und Steuern für UG lernen

CodonBERT

Repository for mRNA Paper and CodonBERT publication.

daily-cognitive-eval

A web app that allows you to test your cognitive performance.

deepseed

DiffDock

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

dldl

Deeply Learning Deep Learning

DNA-Diffusion

🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨

DNABERT_2

The official implementation of DNABERT-2.

evo

DNA foundation modeling from molecular to genome scale

fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

gflownet

GFlowNet library specialized for graph & molecular data

LineFormer

Line Chart Data Extraction: Official code for LineFormer - ICDAR23 Paper

marxville

A MIT-licensed, deployable starter kit for building and customizing your own version of AI town - a virtual town where AI characters live, chat and socialize.

MMDiff

Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion

mres-s3

mres-s5

MRes_2023_Protocols

nf-rnaseq-pipeline

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

nucleotide-transformer

🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

s1a-course-work

SecretoGen

A conditional generative model for signal peptides

TSignal

yeast-GEM

The consensus GEM for Saccharomyces cerevisiae

dna-tokenizer-app

Online playground for DNA tokenizers

esm3

modal-jbrowse

Deployment of JBrowse on modal.com

modal-rna-seq-pipeline

An RNA-seq pipeline build on top of modal.com

protein-mgem