EpiContactTrace is a package for facilitating livestock contact tracing and risk based surveillance. EpiContactTrace uses the network parameters: in-degree, out-degree, ingoing contact-chain and outgoing contact-chain, which are relevant for forward- and backward contact-tracing respectively. The package can generate reports to visualize the contact structure on the farm level.
You can track (and contribute to) development of EpiContactTrace at
https://github.com/stewid/EpiContactTrace.
To install the latest release on CRAN
install.packages("EpiContactTrace")
To install the development version of EpiContactTrace, it's easiest to
use the devtools package:
# install.packages("devtools")
library(devtools)
install_github("EpiContactTrace", "stewid")
The EpiContactTrace package is licensed under the European Union
Public Licence (EUPL) http://ec.europa.eu/idabc/eupl