This repository constains the code and a detailed pipeline used for transcriptome assembly, orthology inference and phylogenomic analyses in Cunha TJ, Giribet G. 2019 A congruent topology for deep gastropod relationships. Proc. R. Soc. B 286: 20182776. http://dx.doi.org/10.1098/rspb.2018.2776
If you use the pipeline or scripts, please cite the publication.
The html pipelines are properly viewed by downloading the repository and opening the html files in a browser.
Updates to the scripts are maintained in the phylo_scripts repository.