Snakemake workflow for running inStrain on metagenomes
- import genome list
- download genome file
- run drep
- create scaffold to bin
- run Prodigal
- index drepped genome list
- map reads
- profile
- compare
Snakemake workflow for running inStrain on metagenomes
Snakemake workflow for running inStrain on metagenomes
Snakemake workflow for running inStrain on metagenomes
MIT License