tamerh / rosalind

Rosalind bioinformatics exercises in Rust http://rosalind.info

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Rosalind

Solutions to the bioinformatics problems presented on Rosalind http://rosalind.info

ID Title Notes
DNA Counting DNA Nucleotides
RNA Transcribing DNA into RNA
REVC Complementing a Strand of DNA
FIB Rabbits and Recurrence Relations
GC Computing GC Content
HAMM Counting Point Mutations
PROT Translating RNA into Protein
SUBS Finding a Motif in DNA Overlapping string search
CONS Consensus and Profile
GRPH Overlap Graphs Fun graph structures
ORF Open Reading Frames
PERM Enumerating Gene Orders Heap's algorithm for permutations
PRTM Calculating Protein Mass
IPRB Mendel's First Law
MPRT Finding a Protein Motif Implemented a backtracking DFA
REVP Locating Restriction Sites OCaml
SPLC RNA Splicing
PROB Introduction to Random Strings
KMP Speeding Up Motif Finding
FIBD Mortal Fibonacci Rabbits
LCSM Finding a Shared Motif
LEXF Enumerating k-mers Lexicographically
MRNA Inferring mRNA from Protein
LONG Genome Assembly as Shortest Superstring
PMCH Perfect Matchings and RNA Secondary Structures
SIGN Enumerating Oriented Gene Orderings
IEV Calculating Expected Offspring
LIA Independent Alleles
LGIS Longest Increasing Subsequence
PPER Partial Permutations
SSEQ Finding a Spliced Motif
TRAN Transitions and Transversions
TREE Completing a Tree

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Rosalind bioinformatics exercises in Rust http://rosalind.info

License:MIT License


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Language:Rust 94.5%Language:OCaml 5.5%