fengxialiu's repositories
25836
wgs pipe and drug
000
Language:GoGPL-3.0000
cnvkit
Copy number variant detection from targeted DNA sequencing
Language:PythonNOASSERTION000
CNVpytor
a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads
Language:PythonMIT000
copy-number-analysis
Explore, compare, and evaluate Bioconductor packages related to genomic copy number analysis
Language:R000
Cyrius
A tool to genotype CYP2D6 with WGS data
Language:PythonApache-2.0000
ensembl-vep
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
Language:PerlApache-2.0000
gencore
Generate consensus reads to reduce sequencing noises and remove duplications
Language:C++MIT000
000
hgvs
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
Language:PythonApache-2.0000
Language:Python000
000
pe
pe reads
Language:Perl000
SpliceAI
A deep learning-based tool to identify splice variants
NOASSERTION000
000
GPL-3.0000
TCAG-WGS-CNV-workflow
Scripts involved in our workflow for detecting CNVs from WGS data using read depth-based methods
MIT000
testgit
git learn
000
000
GPL-3.0000
WGS_WDL
妇幼WGS的WDL版流程
000
000