takashi-yamanashi

Takashi Yamanashi's starred repositories

UCE is a zero-shot foundation model for single-cell gene expression data

Language:PythonMIT15200

Non-parametric density inference for single-cell analysis.

Language:Jupyter NotebookGPL-3.06200

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

Language:Jupyter NotebookBSD-3-Clause134400

Formalizing and benchmarking open problems in single-cell genomics

Language:PythonMIT31400

Millefy: Genome browser-like visualization of single-cell RNA-seq dataset

Language:RNOASSERTION2700

Scripts to perform active learning as described in the referenced article.

Language:Jupyter Notebook1200