Zachary A Szpiech's repositories
predictGMAP
A small program for interpolating genetic map distances
param_parser
Command line argument parsing
blue_af
Calculate BLUE allele frequencies
Language:Python000
dog_recomb
Data associated with Auton et al., PLOS Genetics, 2013
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dog_recombination
Supporting data for doi:10.1534/g3.116.034678: A Pedigree-Based Map of Recombination in the Domestic Dog Genome
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gala2-ROH
Computational pipeline for GALA II project analyzing runs of homozygosity
Language:RMIT000
respect
A program for computing and plotting uni- and bi-variate MAF spectrums
Language:C++GPL-3.0000
ROHsims
Simulation code from Szpiech et al. (2019) AJHG In Press.
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Rxy-kin
Compute Rxy statistic for testing purging of alleles with related samples
Language:Python000