sysbiolux

DCcov

Drug repositioning of single and drug combinations using Flux Balance Analysis.

rFASTCORMICS

FALCON

FALCON: A Toolbox for the Fast Contextualization of Logical Networks

IDARE

IDARE - Multiomics Visualisation in Cytoscape

Biomass_formulation

DeepOncoAI

ML cancer drug sensitivity

Helgueta_et_al_2023

Companion repo for the article by Sergio Helgueta et al.

Herbal_drug_prediction

A workflow for ranking herbal drugs using metabolic modeling and flux variability anaylsis.

IDARE-QuickStart

MedicagoScripts

Multi-tissue-model

Gui-et-al

ISB705MetabolicNetworkModeling

JavaEncFS

A Java Interface for encFS on Linux and Mac

MelanomaPaper

Consensus models of Bintener et al. 2023

scFASTCORMICS

AKR1A1-Deficiency

cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

cobratoolbox_rFASTCORMICS

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

cobratoolboxrFASTCORMICS

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

GBM_survival

GliomaGEM

Glioma metabolic modelling for repurposing of single and combination drugs

GomezRamos_et_al_2023

IDAREBarChartsPlugin

A Plugin for IDARE which provides Bar Chart visualisations

IDAREGEOSoftReader

A plugin for IDARE that proivdes a reader for GEO .soft files.

IHEC_metabolism

MD_network_map

MidbrainOrganoid_Miro1_scMetabMod

Multi-cell population modelling predicts metabolic activity of midbrain organoids

NutriHuMiX

TRAIL_IZI_Melanoma