Bioinformatics and Systems Biology Laboratory's repositories
TreeAndLeaf
An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.
GeneBridge
Rooting Orthologous Genes in Large-Scale Evolutionary Analysis.
PathwaySpace
PathwaySpace is an R package that creates landscape images from graphs containing vertices (nodes), edges (lines), and a signal associated with the vertices.
RGraphSpace
A lightweight package for representing large igraph objects in a normalized coordinate system
Language:R000
RTN_example_TCGA_LIHC
Example of data preprocessing for RTNsurvival, using the TCGA-LIHC cohort