S. Wesley Long's repositories
prephix
Prephix (Pre-Phrecon Input fiXer) -- This is a script that takes in a list of input files and generates one SNP loci output file (containing multiple strains), one reference base file, and a file containing the excluded indel entries.
Language:Python000
prokka_database_maker
Create a genus database to use with Prokka
Language:PythonGPL-3.0000
SampleData
Repository for data to illusrate errors/bug reports
000
srst2
Short Read Sequence Typing for Bacterial Pathogens
Language:PythonNOASSERTION000
Unicycler
hybrid assembly pipeline for bacterial genomes
Language:C++GPL-3.0000