suresh2014

usefull_links

usefull links

mlst_check

Multilocus sequence typing by blast using the schemes from PubMLST

salmon

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

actions-learning-pathway

learning with github

APBioNetTalks

a platform to share bioinformatics talks, tutorials and trainings.

Artemis

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

Awesome-Hacking

A collection of various awesome lists for hackers, pentesters and security researchers

awesome-R

A curated list of awesome R packages, frameworks and software.

GEM_utilities

genome scale metabolic model reconstruction

bfx-workshop

Bioinformatics_resources

This repo is dedicated to make bioinformatics resources available for anyone who wish to enter this field. (You may find it useful or not useful based on your level). I am still embarking my path in the field, just posting things based on my knowledge and the things which worked for me personally, they may/may not work with you, totally fine.

DATA_SCIENCE_IN_BIOLOGY

projects using galaxy, python, linux command line to analyze sequencing data

EToKi

all methods related to Enterobase

genetic-analysis-software

The Rockefeller List of Genetic Analysis Software on github

introduction-to-r

r tutorials

Metabollic_modelling_software

my-world

s.aureus genomics

Publications

my publications and other literature from web

RASflow

RNA-Seq analysis workflow

rnabio.org

website for the rnaseq course

RSubRead_Deseq2

A short guide on how to extract DEGs (differential expressed genes) from Fastq file using a combination of Rsubred and Deseq2

Sequence-manipulation

A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats

shell-genomics

Introduction to the Command Line for Genomics

SibeliaZ

A fast whole-genome aligner based on de Bruijn graphs

SNPGenie

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

suresh2014

Config files for my GitHub profile.

suresh2014.github.io

Omics datascience

TeachingMaterial

Various teaching material

Team-Genomics-One-A

A team of Diverse, Dynamic and Genomic enthusiasts working together towards a common goal to work for the society by practicing Science 🔬

team_genomics_one_a