summukhe / NMABasedMutantAnalysis

Contains list of scripts and base codes that can be used to perform normal mode based analysis of mutation effect on structural dynamics

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NMABasedMutantAnalysis

The repository contains script and external folder.

External folder contains external utility that scripts are dependent on. External scripts must be installed centrally, i.e., added to the PATH environment variable, so that can be invoked from any location.

The scripts are dependent on few more external library SCWRL4, PULCHRA, FREESASA, Rscript.

Also following R packages are important for the script to function properly

  1. ggplot2
  2. bio3d

Each scripts in the script folder are commandline utility to perform unique operation related to Protein Mutation, Normal Mode Analysis, Mode equivalence Analysis and many more related geometric and algebraic operations.

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Contains list of scripts and base codes that can be used to perform normal mode based analysis of mutation effect on structural dynamics


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