sujaikumar

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Wellcome Sanger Institute

Edinburgh, UK

https://ylog.org/sujai

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blaxterlab

Sujai Kumar's repositories

assemblage

Tools for working with second gen assemblies, fasta sequences, etc

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tardigrade

Scripts and relevant processed data files for Boothby et al 2015 and Koutsovoulos et al 2015 tardigrade genome papers

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2013-davis-assembly

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blobtools

Application for the visualisation of draft genome assemblies and general QC

Language:PythonGPL-3.01 20

bucklab

Language:PerlMIT030

Badger

A lightweight genome environment

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gff_parser

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KAT

The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.

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kleinerna

Language:PerlApache-2.0000

OrthoFinder

Accurate inference of orthologous gene groups made easy. "OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthologous gene group inference accuracy"

Language:PythonGPL-3.0020

shell-novice

Software Carpentry introduction to the shell for novices.

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tabula-blasta

Scripts for working with tabular NCBI blast output

Language:Perl020

test-workflows

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tolcal

Calendar for Tree of Life

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