suecharo

ga4gh-sdk

Generic SDK and CLI for GA4GH API services

dagu

Developer-friendly, minimalism Cron alternative, but with much more capabilities. It aims to solve greater problems.

Togothon

yevis-cli

CLI tool to support building and maintaining Yevis workflow registry

jsonld-checker

A tool for checking the validity of JSON-LD objects

workflow-registry

Workflow registry published by DDBJ

mui-markdown

mui-markdown helps you render MD/MDX files with MUI components.

cwl-ts-auto

Autogenerated TypeScript bindings for CWL

TRS-cli

Client for GA4GH Tool Registry Service (TRS) API service

trs-filer

Lightweight, flexible Flask/Gunicorn-based GA4GH TRS implementation

MetaPlatanus

De novo metagenome assembler

cwl-utils

Python utilities for CWL

sapporo

A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification and a web application for managing and executing those WES services.

lookpath

The minimum and most straightforward way to check if command exists and where the executable is, without spawning child_process.

cwl-ts

Typescript data model for Common Workflow Language

cwl-inspector

This tool provides a handy way to inspect properties of tools or workflows written in Common Workflow Language

ipython2cwl

IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.

drill-hawk

A visualizer of workflow execution records for CWL

dataviper

Data Profiling and Basic Quality Assessment tool, for the very beginning phase of your project.

covid-19-bh20

COVID-19 Biohackathon April 5-11 2020

tbsk-orch.com

ep3

A workflow engine for CWL that aims to have a pluggable architecture

elixir-cloud-aai

Welcome page and service overview

proWES

Proxy service for injecting middleware into GA4GH WES requests

cwl-WES

Trigger CWL workflows via GA4GH WES and TES

BioHackathon-projects-2019

This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage projects, publish materials, create code, etc.

vivliostyle.js

📖 The power of CSS typesetting, right at your fingertips.

viola

Online editor for printing and publishing

bh19

The NBDC/DBCLS BioHackathon 2019

fastprogress

Simple and flexible progress bar for Jupyter Notebook and console