stevenweaver / seqcomplexity

Rust package that calculates sequence complexity from FastQ file

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Calculates Per-Read and Total Sequence Complexity from FastQ file.

Installation

Source

Download the source code and run

cargo install

Usage

seqcomplexity -q path/to/sequence.fastq

Arguments:

Parameter Default Description
-q --fastq - The path to the FASTQ file to use
-p, --per-read false Report complexity per read

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Rust package that calculates sequence complexity from FastQ file

License:MIT License


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Language:Rust 100.0%