Stephen Kelly's starred repositories

makefat

A tool for making fat OSX binaries (a portable lipo)

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CheatSheets

Decided to move the gist into a repo of it's own so I can better link to the files

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MegaKeep

Log into multiple mega.nz accounts to keep files from being deleted

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colors

Color standards for terminal emulators

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nf-plugin-template

An unofficial template to build Nextflow Plugins

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bamtools

C++ API & command-line toolkit for working with BAM data

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vt

A tool set for short variant discovery in genetic sequence data.

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nf-hello

Nextflow plugin implementation skeleton

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kmer-cnt-go

K-mer counting in golang

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cwl.go

CWL (and input file) parser for Golang

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wr

High performance Workflow Runner

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nf-wr

WR extension module for Nextflow

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martian

Language and framework for high performance computational pipelines.

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aws-doc-sdk-examples

Welcome to the AWS Code Examples Repository. This repo contains code examples used in the AWS documentation, AWS SDK Developer Guides, and more. For more information, see the Readme.md file below.

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aws-batch-101

AWS Batch 101

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aws-sdk-go

AWS SDK for the Go programming language.

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boinc

Open-source software for volunteer computing and grid computing.

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nf-training-advanced

Customer workshop materials

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singularity-rstudio

Information on how to set up RStudio Workbench with SLURM Launcher and Singularity

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biotdg

Bioinformatics Test Data Generator

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llama-chat

Chat with Meta's LLaMA models at home made easy

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csvtk

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

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Primes

Prime Number Projects in C#/C++/Python

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pytest-wdl

WDL plugin for pytest

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