Minimal(ish) Codespaces environment for R
This repo provides a lightweight and batteries-included Codespaces example for R. Powered by the Rocker Project's Devcontainer Features, you can get a fully functioning R environment up in cloud in a few minutes. What's more, thanks to r2u you can add easily to this environment by installing new R packages in a fast and failsafe way.
Try it out
To get started, simply click on the green "Code" button at the top right. Then select the "Codespaces" tab and click the "+" symbol to start a new Codespace.
The first time you do this, it will open up a new browser tab where your Codespace is being instantiated. This first-time instantiation will take a few minutes (feel free to click "View logs" to see how things are progressing). But your Codespace should deploy almost immediately when you use it again in the future.
Once the VS Code editor opens up in your browser, feel free to open up the
example.R and run the code: Highlight or hover over line(s) and execute them
by hitting Cmd+Return (Mac) / Ctrl+Return (Linux / Windows).
Don't forget to close your Codespace once you have finished using it. Click the blue "Codespaces" tab at the very bottom left of your VS Code editor and select "Close Current Codespace" in the resulting pop-up box. You can restart it at any time, by going to https://github.com/codespaces and clicking on your instance.
Local DevContainer build
Codespaces are just DevContainers running in the cloud (where DevContainers are
themselves just Docker images running with some VS Code sugar on top.) To test
this setup locally, simply clone the repo and open it up in VS Code. You will
need to have Docker installed and running on your system (see
here). You will also need the
Remote Development extension
(you will probably be prompted to install it automatically if you don't have it
yet). Select "Reopen in Container" when prompted. Otherwise, click the >< tab
at the very bottom left of your VS Code editor and select this option. To shut
down the container, simply click the same button and choose "Reopen Folder
Locally". You can always search for these commands via the command palette too
(Cmd+Shift+p / Ctrl+Shift+p).
Acknowledgments
There are a few key "plumbing" pieces that make everything work here. Thanks to:
- The Rocker Project team, especially @eitsupi, for maintaining the R DevContainer Features.
- @renkun-ken and the rest of the VS Code R extension team.
- @eddelbuettel (r2u) and @Enchufa2 (bspm) for providing the infra that enables fast and safe binary R package installation on Linux.