stephenslab / dsc

Repo for Dynamic Statistical Comparisons project

https://stephenslab.github.io/dsc-wiki

stephenslab/dsc Issues

dsc-query error ERROR: __init__() got multiple values for argument 'schema'
Updated 8 months ago4
dsc allows sql keywords
Updated 2 years ago2
Error messages append to the same file
Updated 2 years ago
Irregular behavior with large numbers of files and quick running modules
Updated 2 years ago3
Accessing R libraries from renv
Closed 2 years ago3
conda package for dscrutils?
Closed 3 years ago11
Sugggestion for more informative error message
Updated 3 years ago
ERRROR: Threads can only be started once
Updated 3 years ago4
cannot import name 'execute_workflow' from 'sos'
Closed 3 years ago3
Add an interface to extract modules' runtime
Closed 3 years ago2
New execution logic: module level sequential execution and group all
Updated 4 years ago3
Detect and disallow orphan downstream modules
Updated 4 years ago14
ERROR: Required Python Module rpy2>=3.0.1 is not available or obsolete. Please install it and try again.
Closed 4 years ago6
A few minor typos in wiki
Closed 4 years ago6
Duplicated combination of parameters in parameter group syntax
Closed 4 years ago
Interface for using docker / singularity images per module
Closed 4 years ago
Output x is defined in module a but not in module b; error reported by dscquery
Closed 5 years ago1
A better `--keep-going` behavior
Closed 5 years ago12
Combinations of parameters syntax
Closed 5 years ago3
Non-linear pipeline file naming convention issue
Closed 5 years ago2
Running dsc simultaneously
Closed 5 years ago1
ERROR: '.pipelines' in reproducing numerical comparison
Closed 5 years ago5
dscquery takes long time to load data
Updated 5 years ago8
ERROR: cannot import name 'script_to_html' from 'sos.converter' (/afs/umich.edu/user/z/a/zaczhang/anaconda3/lib/python3.7/site-packages/sos/converter.py)
Closed 5 years ago3
ERROR: Module or group name liter_data is not defined!
Closed 5 years ago7
SuSiE Toy example Fatal Python error
Closed 5 years ago3
Error in Actual commands used for SuSiE paper
Closed 5 years ago5
A `dsc-setup` command
Updated 5 years ago4
Include `dsc script.dsc -h` output to the script browser HTML
Closed 5 years ago
Keep .stdout and .stderr files
Closed 5 years ago1
Separating heavy / light jobs on cluster
Updated 5 years ago2
Add docker and singularity images, and environments (conda etc)
Updated 5 years ago
Implement dsc --log
Updated 5 years ago
Behavior of comments in DSC script
Updated 5 years ago1
Module parameter clashes with Python keyword
Closed 5 years ago
Revise description of "touch" flag in dsc --help
Closed 5 years ago1
Handle parameter name conflict with Python keywords
Updated 5 years ago
Print more complete error messages before DSC terminates
Closed 5 years ago2
Output behavior when only the module name is asked for
Closed 5 years ago13
Implement user-friendly function in dscrutils to load a DSC result
Closed 5 years ago24
Slow signature checking / caching at the end of each module
Closed 5 years ago16
Rethink of the "fail-fast" notion
Closed 5 years ago5
Possible connection issues with `slurm / PBS`
Closed 5 years ago2
Allow for local queues for modules
Closed 5 years ago5
Behavior of `--ignore-errors`
Closed 5 years ago1
[dscrutils] querying issue
Closed 5 years ago17
Output only requested targets in dscquery and dsc-query
Closed 5 years ago3
dscquery error when target is missing in conditions, even though it is available
Closed 5 years ago
Add an option to extract complex data types in `dscquery`
Closed 5 years ago4
Improve error message reported for invalid module group specification
Closed 5 years ago