Stephen Ra (stephenra)

stephenra

Geek Repo

Company:@prescient-design @genentech

Home Page:stephenra.com

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Stephen Ra's repositories

guacamol

Benchmarks for generative chemistry

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moses

Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models

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stephenra.github.io

Personal website

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ffi-experimental

Code generation / FFI binding using libtorch 1.x for the next Hasktorch release

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hasktorch

Tensors and neural networks in Haskell

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pyro

Deep universal probabilistic programming with Python and PyTorch

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cleanlab

The standard package for machine learning with noisy labels and finding mislabeled data in Python.

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deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

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deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

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edward

A library for probabilistic modeling, inference, and criticism. Deep generative models, variational inference. Runs on TensorFlow.

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jax

Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more

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lincs-cell-painting

Processed Cell Painting Data for the LINCS Drug Repurposing Project

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neural-processes

This repository contains notebook implementations of the following Neural Process variants: Conditional Neural Processes (CNPs), Neural Processes (NPs), Attentive Neural Processes (ANPs).

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openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

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PlotNeuralNet

Latex code for making neural networks diagrams

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pytorch-flows

PyTorch implementations of algorithms for density estimation

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tch-rs

Rust bindings for the C++ api of PyTorch.

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unlikelihood_training

Neural Text Generation with Unlikelihood Training

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