stephaniehicks

Stephanie Hicks's repositories

qsmooth

Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumptions about the data generation process: quantile normalization and quantile normalization between groups.

Language:R50 6 11

methylCC

R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms

Language:R19 6 9

jhustatcomputing2022

Course website for Johns Hopkins BSPH Statistical Computing (Biostatistics 140.776) in Fall 2022

Language:JavaScript16 2 1

jhustatprogramming2022

Course website for Biostat 840 in Fall 2022

Language:JavaScript12 5 2

jhustatcomputing2021

Course website for JHSPH Statistical Computing (Biostatistics 140.776) in Fall 2021

Language:HTML600

quantro

quantro: Bioconductor package to test for global normalization assumptions

Language:R5 2 3

large-scale-data-base

Base Rmd files for Orchestrating Large-Scale Data Analysis in Bioconducotr

Language:Makefile4 5 1

stephaniehicks.github.io

Website for Stephanie C. Hicks

Language:JavaScript4 10

jhuquantneuro2022

Course materials for the JHU Quantitative molecular neuroscience Fall 2022 course (ME.440.825.0001.FA22) from Stephanie Hicks

Language:R3 20

quantify-snrna

Language:R3 2 1

atlasscalespatialclustering

Repo to share code for the atlas-scale spatial clustering CZI project

Language:R2 40

jhustatprogramming2023

Course website for Biostat 140.777 in Fall 2023

Language:JavaScript200

benchmarkfdrData2019

Data and Benchmarking Results from Korthauer and Kimes et al. (2019)

Language:RMIT1 30

bodymapRat

This package contains a SummarizedExperiment object from the Yu et al. (2014) paper that performed the rat BodyMap across 11 organs and 4 developmental stages. PMID: 24510058

Language:R1 20