Stefan Helfrich's repositories
frangi-vesselness
Test for Frangi Vesselness filter
trackmate-overlay-detector
A detector that couples ROIs from an ImageJ 1.x Overlay to Spots for tracking
colour_deconvolution_IJ2
Colour Deconvolution plugin for IJ2
esrf-imagej-plugins
Plugins for ImageJ created at the ESRF
example-script-collection
Example project demonstrating how to package ImageJ scripts into a single jar file
ilastik4ij
ImageJ plugins to run ilastik workflows
imagej-legacy-harmonization-mcve
MCVE for testing harmonization in imagej-legacy
imagej-ops
ImageJ Ops: A framework for reusable algorithms
imglib2-algorithm
Image processing algorithms for ImgLib2
IntroToJulia
A Deep Introduction to Julia for Data Science and Scientific Computing
knip-cellprofiler
KNIME Image Processing - CellProfiler Integration
knip-externals
Wraps SciJava projects into OSGi Bundles for use with KNIME Image Processing
knip-imagej2
KNIME ImageJ/ImageJ2 Integration (based on KNIME Image Processing)
MorphoLibJ
Collection of mathematical morphology methods and plugins for ImageJ
neubias-tm-gitignore
Default .gitignore for NEUBIAS training material
presentation-frameworks-evaluation
Test repository to check out different Markdown-based presentation frameworks.
scijava-ci-deploy-test
Test "parallel deployment" from Travis and AppVeyor
stelfrich.github.io
Personal website at https://stelfrich.github.io
teachopencadd
TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
TrackMate-extras
Some extra modules for TrackMate
training-repos
A super-module of all the repositories used for training sessions