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JunShang (stead99)

stead99

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dxCompiler

WDL and CWL compiler for the DNAnexus platform

Language:ScalaLicense:Apache-2.0Stargazers:31Issues:0Issues:0

Folder-Structure-Conventions

Folder / directory structure options and naming conventions for software projects

License:MITStargazers:1868Issues:0Issues:0

scanpy

Single-cell analysis in Python. Scales to >1M cells.

Language:PythonLicense:BSD-3-ClauseStargazers:1818Issues:0Issues:0

reference_data

Reference data: BED files, genes, transcripts, variations.

Language:PythonStargazers:79Issues:0Issues:0

reoa

Relative Expression Ordering Analysis (REOA) package

Language:CLicense:GPL-3.0Stargazers:20Issues:0Issues:0

tasks

A collection of reusable WDL tasks. Category:Other

Language:WDLLicense:MITStargazers:85Issues:0Issues:0

arcasHLA

Fast and accurate in silico inference of HLA genotypes from RNA-seq

Language:PythonLicense:GPL-3.0Stargazers:111Issues:0Issues:0

gatk

Official code repository for GATK versions 4 and up

Language:JavaLicense:NOASSERTIONStargazers:1650Issues:0Issues:0

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

Language:JavaScriptLicense:GPL-3.0Stargazers:1190Issues:0Issues:0

deep-learning-with-r-notebooks

R notebooks for the code samples of the book "Deep Learning with R"

Language:HTMLLicense:MITStargazers:604Issues:0Issues:0

ailearning

AiLearning：数据分析+机器学习实战+线性代数+PyTorch+NLTK+TF2

Language:PythonLicense:NOASSERTIONStargazers:38748Issues:0Issues:0

tensorflow-zh

谷歌全新开源人工智能系统TensorFlow官方文档中文版

Language:TeXStargazers:12357Issues:0Issues:0

tensorflow_cookbook

Code for Tensorflow Machine Learning Cookbook

Language:Jupyter NotebookLicense:MITStargazers:6198Issues:0Issues:0

sklearn-doc-zh

:book: [译] scikit-learn（sklearn） 中文文档

Language:CSSLicense:NOASSERTIONStargazers:5085Issues:0Issues:0

handson-ml

⛔️ DEPRECATED – See https://github.com/ageron/handson-ml3 instead.

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:25141Issues:0Issues:0

ml-mastery-zh

:book: [译] MachineLearningMastery 博客文章

Language:JavaScriptLicense:NOASSERTIONStargazers:644Issues:0Issues:0

d3-api-demo

《D3 API 详解》随书源码

Language:HTMLLicense:Apache-2.0Stargazers:376Issues:0Issues:0

cookiecutter-pypackage

Cookiecutter template for a Python package

Language:PythonLicense:BSD-3-ClauseStargazers:2Issues:0Issues:0

fs.ossfs

AliCloud OSS filesystem for PyFilesystem2

Language:PythonLicense:MITStargazers:6Issues:0Issues:0

choppy-pipe

An integrated analysis platform for efficiently achieving computational reproducibility

Language:PythonLicense:NOASSERTIONStargazers:8Issues:0Issues:0

biovis-reportr

A R SDK for BioVis Report System.

Language:RLicense:AGPL-3.0Stargazers:2Issues:0Issues:0

ggsci

🦄 Scientific journal and sci-fi themed color palettes for ggplot2

Language:RLicense:GPL-3.0Stargazers:654Issues:0Issues:0

ggvis

Interactive grammar of graphics for R

Language:RLicense:NOASSERTIONStargazers:715Issues:0Issues:0

MS.liverK

Molecular classification of hepatocellular carcinoma samples

Language:RLicense:GPL-2.0Stargazers:7Issues:0Issues:0

ShinyCNV

a Shiny/R application to view and annotate copy number variations

Language:RStargazers:26Issues:0Issues:0

SATurn

High-throughput molecular biology platform from the SGC

Language:HTMLLicense:NOASSERTIONStargazers:5Issues:0Issues:0

SLIDE

A visualization tool for Systems-Level Interactive Data Exploration

Language:JavaLicense:BSD-2-ClauseStargazers:12Issues:0Issues:0

MetaboAnalystR

R package for MetaboAnalyst

Language:RLicense:NOASSERTIONStargazers:294Issues:0Issues:0

tcia-ct-scan-dataset

Dataset of head and neck CT scans and segmentations in NRRD format.

License:CC-BY-4.0Stargazers:88Issues:0Issues:0

dash-oil-and-gas-demo

Dash Demo App - New York Oil and Gas

Language:PythonStargazers:187Issues:0Issues:0