stanleyjs

deprecated

Python @deprecated decorator to deprecate old python classes, functions or methods.

dna2vec

dna2vec: Consistent vector representations of variable-length k-mers

graph-regularized-nnls

graph-scattering-transforms

Code for experimentation on graph scattering transforms

harmonic-alignment

Laplacians.jl

Algorithms inspired by graph Laplacians: linear equation solvers, sparsification, clustering, optimization, etc.

Libra

mamba-solve

Fast solutions to large sparse systems in python

MASSPRF_10July2016

matplotlib

matplotlib: plotting with Python

netNMF-sc

netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data

numpy

The fundamental package for scientific computing with Python.

openTSNE

Extensible, parallel implementations of t-SNE

PackageCompiler.jl

Compile your Julia Package

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

POT

POT : Python Optimal Transport

pydata-sphinx-theme

Bootstrap-based sphinx theme from the PyData community

PyDOC

A Sublime Text plugin that supports Python 2 & 3 documentation search from selections in the editor

pygsp

Graph Signal Processing in Python

pypca

A universal interface for dimensionality reduction using PCA

pytorch

Tensors and Dynamic neural networks in Python with strong GPU acceleration

scikit-learn

scikit-learn: machine learning in Python

sphinx

Main repository for the Sphinx documentation builder

sphinx-material

A material-based, responsive theme inspired by mkdocs-material

SR3

SR3 Fusion Clustering for multimodal data

SublimeLinter-gfortran

A sublimelinter plugin for modern fortran.

SUGAR

Synthesis using Geometrically Aligned Random-walks

tasklogger

An extension to the core python logging library for logging the beginning and completion of tasks and subtasks.