Aaron Stern's repositories
reproduce_sor_2016
Code and notebooks for review of Pitt et al, 2016
deep-learning-projects
Collection of code and notebooks implementing small deep learning examples/project in tensorflow/keras.
discoal
[this fork prints trajectories] discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes including population splits, admixture events, and ancient samples
MajorScalesPlots
color-coded plots of the major scales
ldsc
LD Score Regression (LDSC)
mullets
multi-locus time-series analysis
pyslim_ssvs
scripts for simulating ssvs using tree sequences in msprime/slim.
rhps_coalescent
Code associated with the paper "Reconstructing the history of polygenic scores using coalescent trees" by M.D. Edge and G. Coop.
spaceness
Space is the Place: Effects of Continuous Spatial Structure on Analysis of Population Genetic Data