Statens Serum Institut's repositories
bifrost-archive
Bacterial Surveillance platform, focused on QC in Denmark
CC398_global_phylogeny
Preliminary work of CC398 global phylogeny
N_Meningitidis_CC11_SgC_SgW
Neisseria Meningitidis CC11 SgC and SgW Nextstrain project
S_aureus_CC9_host_association
Preliminary data, for internal use only!
MIT000
bifrost-qcquickie
Fast assembly
cge_pointfinder_kma
Run CGE pointfinder in kma mode
CleanRecomb
Cleans putative recombination events from a SNP matrix
pointfinder
A pointfinder tool
000
public_scripts
Scripts for public use
punktreskma
SSI wrapper for calling and parsing the output of KMA (Kmer Aligner) for finding point mutations
Language:PythonGPL-3.0000
SRA_download
Tools for SRA download
Language:R000