ssayols's repositories
bioinformatics
A collection of bioinformatics related knowledge
R-epository
some useful R tricks
awesome-awesomeness
A curated list of awesome awesomeness
awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
bioconductor.org
Website for bioconductor.org
ChIP-seq-analysis
ChIP-seq analysis notes from Tommy Tang
DMR-idibell-find
look for DMR based on the correlation of proximal sites
DNA-methylation-analysis
my notes on DNA methylation analysis (arrays and sequencing data)
DNA-seq-analysis
my notes on whole exome and whole genome sequencing analysis
NGSpipe2go
a set of NGS pipelines
riboswitch-pipeline
Analysis pipeline used in Strobel et al., "High-throughput identification of synthetic riboswitches by barcode-free amplicon-sequencing in human cells"
RNA-seq-analysis
RNAseq analysis notes from Tommy Tang
thesisdown
An updated R Markdown thesis template using the bookdown package
viewr_imagenet_demo
A demo of using the shinyviewr function in my shinysense package to classify photos using the VGG50 imagenet model.