Simon Nilsson's repositories
mask_rCNN_mouse_resident_intruder
mask rCNN pipeline for detecting a range of body-parts on black and white mice and back-end for creating features for individual identification
sql_ABET_analyzer
Analyzes ABET Lafayette proprietary data in SQLite
Pose_estimation_social_interaction_analysis
Analyze rodent avoidance/approach in social interaction protocols from pose estimation data
Stats_plot_cognitive_behavioral_CPT_performance
uses ggplot to visualize SQL photometry and rCPT behavioral data
3D_designs
3D models and prints - stl files and associated arduino/pyserial code
conference_docs
posters, talks etc.
MedPC-Camera-Control-PySerial-http
Control camera onset and offsets through PySerial, MedPC, and http
Rodent-continous-performance-task-in-psychopy
Rodent continous performance task using PsychoPy and capacitance touch
cover-card
:necktie: Online business card with a minimal landing page theme for any social media or online presence account: fork, edit, and go!
cryptocurrencies
đź“‹ Get a list of all the cryptocurrency symbols and names.
datasets
Datasets used in Plotly examples and documentation
image_processing_scripts
Misc image/video pre-process scrips for ML pipelines
Lean
Lean Algorithmic Trading Engine by QuantConnect (Python, C#)
misc
Miscellaneous files/scripts
mouse_resident_intruder_yolo
Using yolo to track mice in resident intruder protocols
OpenCV_optical_flow_behavior_detection
Base code for using optical flow to detect salient social behaviors
raw_scripts_ML_SimBA_pipeline
Python scripts for generating/evaluating decision ensembles from pose estimation data
simba
SimBA (Simple Behavioral Analysis), a plug-and-play pipeline and GUI for developing behavioral classifiers
simba-docs
documentation
sublime_sphinx_guide
Sublime and Sphinx Guide
umap
Uniform Manifold Approximation and Projection