Sebastian R's repositories
bedtools2
bedtools - the swiss army knife for genome arithmetic
bioconda-recipes
Conda recipes for the bioconda channel.
csaps
Cubic spline approximation (smoothing)
eccb2022_sc_funcomics
Functional analysis of single-cell transcriptomics
fasta_one_hot_encoder
Simple python to lazily one-hot encode fasta files using multiple processes.
GCparagon
commandline tool for fast computation and correction of GC biases in WGS DNA datasets from liquid biopsy samples taking the fragment length into account
handson-ml2
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
machine-learning-mindmap
A mindmap summarising Machine Learning concepts, from Data Analysis to Deep Learning.
minimal_pypackage_template
Minimal cookiecutter template for Python packages
numerical-linear-algebra
Free online textbook of Jupyter notebooks for fast.ai Computational Linear Algebra course
shap
A game theoretic approach to explain the output of any machine learning model.
snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
snakemake_tutorial
Snakemake tutorial based on the official documentation of snakemake
vscode-python
Python extension for Visual Studio Code