srobb1

RelocaTE

Find the locations of TEs using the TSD in unassembled short reads by comparing to a closely related reference genome assembly

SIMR_ontology

Controlled Vocabulary used at SIMR

Apollo

Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

Apple-Snail-Expression-Pattern-Ontology

Apple Snail Expression Pattern Ontology

biological-spatial-ontology

An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces

Chado

the GMOD database schema

chickenCoopController

my chicken coop controller

class_test

CSHLProgForBiol2018

CSHL Prog for Bio 2018, trinity rnaseq section

evop2018

obi

The Ontology for Biomedical Investigations

OBOFoundry.github.io

OBO Foundry Ontology Registry

OLS-treeview

This is the standalone widget for the OLS treeview

ontology-starter-kit

Bootstrap an OBO Library ontology

pato

PATO - the Phenotype And Trait Ontology

PFB2018_testing

testing stuff

PFB_problemsets

Solutions for PFB Problemsets

purl.obolibrary.org

A new system for managing OBO PURLs

simr_imports

simrbase_tools

drupal module for simrbase misc functions

simro

Stowers Institute for Medical Research Ontology ( in developement )

t4d8

This is a temporary repository for Drupal 8 upgrade for Tripal v4. It is meant to house issues related to the upgrade.

test-probsets

test-repo

tripal

The Tripal package is a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other information. The Drupal project page is at http://drupal.org/project/tripal.

tripal_expression_cvterm

Tripal/Drupal Module for creating drupal nodes with chado expression cvterms

tripal_ontologyPages

Display ontology term pages by retrieving info from ols

trpdownload_nbcluster

download csv for nbcluster data

uberon

uber-anatomy ontology

upheno

worm_order_form