sriramlab

sriramlab

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sriramlab's repositories

ProPCA

Fast EM algorithm for a Probabilistic PCA model for Genotype data

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SCOPE

Scalable population structure inference

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ArchIE

A statistical framework for reference-free inference of archaic local ancestry

RHE-mc

Randomized Haseman–Elston regression for Multi-variance Components

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SCORE

SCalable genetic CORrelation Estimator

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SUMRHE

Summary statistics-based Randomized Haseman-Elston regression

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GENIE

Gene Environment Interaction Estimator

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PyRHE

An efficient Python package for Randomized Haseman–Elston regression for Multi-variance Components

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RHE-reg

Randomized HE regression estimator

FAME

This is the software for FAst Marginal Epistasis test (FAME)

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Simulator

Efficient large scale phenotype simulator

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ANCESTOR

Infer ancestries of each parent of an admixed individual

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dating

Estimate dates of admixture events from LD decay

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saber

ScAlaBle Estimator Regressor

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