springer-math / Mathematics-of-Epidemics-on-Networks

Source code accompanying 'Mathematics of Epidemics on Networks' by Kiss, Miller, and Simon http://www.springer.com/us/book/9783319508047 . Documentation for the software package is at https://epidemicsonnetworks.readthedocs.io/en/latest/

springer-math/Mathematics-of-Epidemics-on-Networks Issues

Is the fast_SIR module belong to the complex or simple contagion ？
Updated a year ago2
What transmission module means in SEIR model
Updated a year ago6
Confirm that `transmissions` is ordered by time and if so update documentation
Updated a year ago
Infrence
Updated a year ago1
Work with bipartite location/person graphs
Updated a year ago
Error with initial_recovereds
Updated a year ago1
Heterogeneous infectivity simulation
Closed 2 years ago2
TypeError: draw_networkx_edges() got an unexpected keyword argument 'with_labels'
Updated 2 years ago3
add transparency to simulation display
Updated 2 years ago1
how to get the node state by EoN?
Closed 2 years ago2
for sim.display, give control over plotting arguments
Updated 2 years ago
estimate_R0
Updated 3 years ago3
sim.display has unwanted print statement
Updated 3 years ago
Theorem 6.17
Updated 3 years ago1
Erratum: SIS dynamics (Equation 3.5)
Updated 3 years ago1
confusing in the Competing Diseases example
Updated 3 years ago2
Implementing Adaptive Rewiring (from Chapter 8: Dynamic and adaptive networks)
Updated 4 years ago4
Adjust node sizes in trees that have large depths?
Updated 4 years ago2
Question about gamma distributed incubation period
Closed 4 years ago2
Complex vs Simple Gillespie in Non-pharmaceutical intervention situations
Updated 4 years ago6
Complex contagion inefficiency.
Updated 4 years ago
Gillespie_simple_contagion doesn't handle self-edges right now
Updated 4 years ago1
recovery_weight and compatibility with NetworkX 2.x
Closed 4 years ago1
Discrete State Calculation
Updated 4 years ago1
Multiple Contagions
Updated 4 years ago5
Recovery rate in discrete model
Closed 4 years ago4
What is the unit of time?
Closed 4 years ago7
Dynamic Networks
Closed 4 years ago6
order of inputs/outputs of heterogeneous pairwise
Updated 4 years ago
General Design Qestion
Closed 4 years ago2
SIR on Weighted Networks
Closed 4 years ago1
Efficiency of Adding more compartments
Updated 4 years ago
Parallel or Distributed simulations
Updated 4 years ago
Figure 1.4(b)
Updated 4 years ago2
Progress Callback Feature
Updated 4 years ago2
Plot animation with a graph from matrix
Closed 4 years ago3
timing of infections for initial_infecteds in simulation_investigation objects
Updated 4 years ago
cannot define both initial_recovereds and rho
Updated 4 years ago3
Improve ``hierarchy_pos``
Updated 4 years ago
The homogeneous SIS and SIR models do not have `from_graph` versions.
Updated 4 years ago
Add transmissions and transmission_tree example
Updated 4 years ago
Adding related work and refs to paper
Closed 5 years ago1
Functional testing
Closed 5 years ago1
Can the "Cooperative diseases" example type model be implemented considering complex contagion?
Updated 5 years ago3
Why isn't there a ``discrete_SIS``
Updated 5 years ago
Look into using sortedcontainers in Gillespie code
Closed 5 years ago2
Visualizing SIRV model
Closed 5 years ago2
SIRV model
Closed 5 years ago
Discrete SIR with variable Tr and B
Closed 5 years ago2
Transmissions in full_data code
Closed 5 years ago2