Sophie Ratkai's repositories
Language:Python000
CNVcalling_aux
Additional scripts and files used during the development of the GATK germline CNV calling pipeline
Language:Jupyter Notebook000
Language:Python000
Language:Jupyter Notebook000
MAFfilter
script to filter vcf for variants with MAF<1% and save transcripts used in a tsv
Language:Python000
gatk
Official code repository for GATK versions 4 and up
NOASSERTION000
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
GPL-3.0000
FSND
Public repository for the Full-Stack Nanodegree program.
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Language:Python000