songweizhi

MetaCHIP

Horizontal gene transfer (HGT) identification pipeline

Binning_refiner

Improving genome bins through the combination of different binning programs

MarkerMAG

Linking MAGs with 16S rRNA marker genes

BioSAK

A Swiss-Army-Knife for Bioinformaticians

HgtSIM

A simulator for horizontal gene transfer (HGT) in microbial communities

Tax4Fun2_short_tutorial

A short tutorial for Tax4Fun2

TreeSAK

A Swiss-Army-Knife for manipulating phylogenetic trees

SoftwareCommands

Example commands of some bioinformatic software

songweizhi.github.io

http://songweizhi.github.io

Adaptive_Nanopore_Scripts

Adaptive Nanopore Scripts

bioconda-recipes

Conda recipes for the bioconda channel.

DateArTree

FlowCellBiofilm

Scripts backup for Flow-cell biofilm project

Katana_cmds

some example commands

MetaCHIP2

MetaCHIP2

metaPacBio

Some scripts for the processing of PacBio sequencing data of pooled bacterial genomes

ngphylogeny-django

odp

oxford dot plots

Phylogeny_tutorial

PreOGT

Predicting optimal growth temperature

songweizhi

Sponge_Hologenome

Sponge_Hologenome related scripts

toast2018

Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 20th of March 2018.

tutorials

Tutorials on phylogenetic and phylogenomic inference