SolisLemus lab projects's repositories
solislemuslab.github.io
Github repo for SolisLemus lab website
bioklustering
BioKlustering: a web app for semi-supervised learning of maximally unbalanced genomic data
el-zoominario
El Zoominario: seminar series to increase visibility of Latinx in STEM
HighDimMixedModels.jl
Julia package for fitting regularized linear mixed-effect models on high-dimensional omics data.
potato-seed-cert
Data analysis and visualization for the WI potato seed certification database
virus-linker
Data visualization of virus linker
CAR-LASSO
Conditional Auto-Regressive LASSO
lab-dynamics
Useful documents on guidelines, advice, resources for the lab
data-art-exhibition
Materials for the website for the Data as Art Exhibition series.
learning-data-science
Learning materials for Data Science within biological applications such as WI Fast Plants: https://fastplants.org/
soil-microbiome-nn
Random Forest and Bayesian Neural network model applied to soil microbiome data
snaq-tutorial
Tutorial to infer phylogenetic networks from multilocus data with SNaQ in PhyloNetworks
tropical-stethoscope
Classification of animal sounds in a hyperdiverse rainforest using Convolutional Neural Networks (Sun et al, 2021)
PhyloDiamond.jl
Method to estimate phylogenetic networks from algebraic invariants
bryophytes-introgression
Collaboration with Juan Carlos Villareal Aguilar, Gordon Burleigh
minaa-webapp
The MiNAA Web App is a wrapper around MiNAA built with R Shiny.
sample-size-shinyapp
R Shinyapp to calculate sample size for a given power
simulation-suite
Myriad of scripts to simulate data in phylogenetics
dummy-repo
Dummy repo to practice git/github in the lab
dna-nn-theory
Here, we investigate the robustness, generalization potential and prediction accuracy of widely used convolutional neural network and natural language processing models with a variety of heterogeneous genomic datasets.