Sofia Stamouli's repositories
bioconda-recipes
Conda recipes for the bioconda channel.
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configs
Config files used to define parameters specific to compute environments at different Institutions
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gms-artic
A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics).
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meatballs
An open source recipe book from the awesome staff of Clinical Genomics
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modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
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repo1
Trigger repo1 on repos2 release
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repo2
Repo2 is a test for new releases
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taxprofiler
Highly parallelised multi-taxonomic profiling of shotgun metagenomic data
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test-datasets
Test data to be used for automated testing with the nf-core pipelines
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tools
Python package with helper tools for the nf-core community.
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