Sofia Haglund's repositories
my_astro_page
⭐ Personal page
my-react-weather-app
:sun_behind_rain_cloud: React weather app
sofiahag-memory
:unicorn: Memory Game
sofiahag-react-todo
🗒️ Simple Task React/Next App
charon
Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.
checkQC
CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
cookiecutter
Template for your own top-end Nextflow pipeline, customised using Cookiecutter
coursera-angularjs
Coursera AngularJS
coursera-webdev
Coursera test repository
create-react-app
Set up a modern web app by running one command.
ngisweden.se
Wordpress theme and plugins for ngisweden.se
genomics-status
Tornado server for tracking samples at NGI Stockholm
mdx_outline
Python-Markdown extension to wrap the document logical sections (as implied by h1-h6 headings)
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
MultiQC_NGI
MultiQC plugin for the National Genomics Infrastructure in Stockholm, Sweden.
nf-co.re
Code and files for the main nf-core website.
nf-core-tools
Python package with helper tools for the nf-core community.
NGI_dashboards
SciLifeLab NGI Dashboard Code
ngi_reports
Code to generate reports for use by the NGI in SciLifeLab
OrderPortal
A portal for orders (a.k.a. requests, project applications) to a facility from its users.
rnaseq
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
Sarek
Detect germline or somatic variants from normal or tumour/normal whole-genome sequencing data