Jonny Saunders's repositories
joss-migrate-pmc
migrate joss-papers to pmc format (see `sneakers-the-rat/joss-papers-pmc`)
joss-papers-pmc
Accepted JOSS papers
linkml-model
Link Modeling Language (LinkML) model
buffy
Editorial bots generator
curies
🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python
evio
Virtualized overlay networking for the fog. The Evio network spans the continuum, from the cloud to the edge, providing a virtual private layer 2 network suitable for edge devices in IoT workloads.
hdmf
The Hierarchical Data Modeling Framework
inara
Tools to create JOSS/JOSE publishing artifacts
linkml
Linked Open Data Modeling Language
linkml-runtime
Runtime support for linkml generated models
moseq2-app
MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.
moseq2-extract
Here it comes...
moseq2-model
Python scripts for linking kinect-extraction to pybasicbayes
moseq2-pca
Code for computing pcs from extracted data to submit for modeling
moseq2-viz
Visualization toolbox for MoSeq2
pydantic
Data validation using Python type hints
pydata-sphinx-theme
A clean, three-column Sphinx theme with Bootstrap for the PyData community
pyhsmm-autoregressive
autoregressive plugin
pynwb
A Python API for working with Neurodata stored in the NWB Format
pyopensci.github.io
This is the website for pyOpenSci. Contributions welcome!!
pyosMeta
A package that updates pyOpenSci contributor and package metadata on our website
pyosPackage
An example package that compliments our package guide & tutorials.
python-package-guide
scientific Python package recommendations & guidance curated by pyOpenSci
ruff-pycharm-plugin
PyCharm plugin for ruff. This plugin provides reformat code using ruff.
SMW-Mermaid
Provides a parser function to generate diagrams and flowcharts with the help of the mermaid script language
software-peer-review
pyOpenSci's guidebook for package authors, reviewers, and editors
sphinx
The Sphinx documentation generator