smestern

pyCEDFS

A very WIP python module to allow reading and import of Ced File System (CFS) electrophysiology files generated by the signal software suit

pypatchOTDA

ichiyama_2022_code

ni_dynamicclamp

Dynamic Clamp interface for brian2 <-> NI daq systems

pyAPisolation

Feature Extraction and Other tools for Patch-Clamp electrophysiology data

AdEx-Neural-ODE

AdEx IF single neuron model solved using neural ODEs

sNMO

sNMO : single neuron model optimzier (SNMO)

abfanalysiswebdemo

clustering-stability

Clustering stability based on https://arxiv.org/pdf/physics/0005046

crh_model_2024

csv2hdf

Simple working script to convert CSV files to HDF files

davis2021ncomms

drcme

Dimensionality-reduction and classification for morphology and electrophysiology

eskuebler.github.io

JMT Primate Cell Type Database

example-abf-files

example abf files

ipfx

nwb_hackathons

Repository for collecting materials from nwb hackathons

ot_da_matlab

Optimal Transport based Domain Adaptation in Matlab

patchotda

PCCA_Notebooks

PCCA_Notebooks_tutorials

plugin-template

Template for creating custom RTXI plugins

pytorch-eventprop

A PyTorch implementation of EventProp [https://arxiv.org/abs/2009.08378], a method to train Spiking Neural Networks

rehack-book

An example jupyter book

smestern

Config files for my GitHub profile.

stdp-mnist-brian2

Brian 2 version of Paper "Unsupervised Learning of digit recognition using STDP"

tkABF_Explorer

simple python tkinter gui for viewing and semi automated analysis of ABF physiology files