slipnitskaya

Sofya Lipnitskaya's repositories

image-tagger

Android App for automated image annotation. The accompanying article is available under the link below.

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caltech-birds-advanced-classification

Bird by Bird using Deep Learning. Advanced classification of bird species. - A serie of tutorials accompanying the same-titled articles on Medium.

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IBM_FINANCE_AP19

Deep learning in Finance with Keras. - NVIDIA Deep Learning Institute workshop (Frankfurt, 2019).

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exp-runner

Simple and extensible framework for data analysis and machine learning experiments in Python.

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deep-learning-tensorflow-ud730

Deep learning with TensorFlow. - Udacity course (2020).

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dmcourse-jgu

Dynamic modeling of protein dynamics using Python. - Tutorial materials for Biomedicine MScs students at JGU, Mainz (Stefan Legewie, Sofya Lipnitskaya; 2017-2020).

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regulAS

regulAS: A Bioinformatics Tool for the Integrative Analysis of Alternative Splicing Regulome using RNA-Seq data.

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bimodality-ranking

Identification of bimodal genes in scRNA-Seq. - Pipeline designed to rank genes by their expression patterns to showcase the 'exp-runner' Python package at work.

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disaster-response-web-app

Flask web app for classification of disaster messages.

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FAVSeq

FAVSeq is a machine learning-based pipeline for identifying factors affecting the difference between bulk and scRNA-Seq experiments.

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vision

Datasets, Transforms and Models specific to Computer Vision

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