Sahana K.'s repositories
Gelada_microbiome
Code for analyzing 16S rRNA microbiome data both cross-sectionally and longitudinally using gelada microbiomes as an example dataset
Pigs-16S-metagenomic-analyses
Code for analyzing 16S rRNA and metagenomic data, SNP data, and immune data from pigs.
Colonization_resistance
Code for analyzing qPCR and 16S data from microbiome-mediated resistance experiments done in vitro
Language:R000
Language:Shell000
GF_mouse_primate_23
Code for analysis of physiology and gene expression data from GF mouse experiment
Language:RGPL-3.0000
Infant_skin
Code for analyzing infant skin microbiome data across body sites and geographic locations
Language:Python000
Language:R000
Skin_methods
Code for analyzing two collection and two storage methods for skin microbiome samples
Language:Python000
GitHub_workshop_2024
GitHub workshop
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