skarrea's repositories
ElastixExperimentTracker
An extension the the elastix image registration framework CLI to efficiently perform and track registration experiments.
biomeddata
FAIR Life Sciences - Data Management Lookup
colorbrewer-python
Colors from ColorBrewer for easy use in Python.
detectron2
Detectron2 is a platform for object detection, segmentation and other visual recognition tasks.
docs
HUNT Cloud Documentation - Repository for https://docs.hdc.ntnu.no
github-workshop
A template repository used for an internal github workshop
githubWorkshopSlides
Slides for internal github course.
gitTestRepo
Test initalizing github repo.
imageMetrics
Implementation of several image metrics.
mriphysics.github.io
http://mriphysics.github.io/
mrsd
A toolkit to generate MR sequence diagrams
nnDetection
nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.
parseRsyncOutput
Parses the output of rsync log
pix2pixHD
Synthesizing and manipulating 2048x1024 images with conditional GANs
pypulseq
Pulseq in Python
pytorch-CycleGAN-and-pix2pix
Image-to-Image Translation in PyTorch
SIRF
Main repository for the CCP SynerBI software
sirf-utilities
A set of python tools for easier and more readable PET reconstruction pipelines in sirf
Viewers
OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages
voxelmorph
Unsupervised Learning for Image Registration